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Spice is a general-purpose electric circuit simulation program for nonlinear dc, nonlinear transient and linear ac analysis.
*GMT*
GMT is an open source collection of ~60 tools for manipulating geographic and Cartesian data sets.
Bioinformatic cluster installed software tools
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blast
BLAST+ is a new suite of BLAST tools that utilizes the NCBI C++ Toolkit. The BLAST+ applications have a number of performance and feature improvements over the legacy BLAST applications.
fastx
FASTX-Toolkit is a collection of command line tools for Short-Reads FASTA/FASTQ files preprocessing.
mrbayes
MrBayes is a program for the Bayesian estimation of phylogeny.
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